Data setup via TCGA.

Re-analysis by R.

OncoLnc Web Tool: Interactively exploring survival correlations, and for downloading clinical data coupled to expression data for mRNAs, miRNAs, or lncRNAs from TCGA.

The Genomic Data Commons (GDC), is a research program of the National Cancer Institute (NCI).

The mission of the GDC is to provide the cancer research community with a unified data repository that enables data sharing across cancer genomic studies in support of precision medicine.

FireBrowse Homepage and BROAD GDAC.

Analysis with FIREHOSE plus TCGA UCSC Xena.

R package: ggplot2.

Data from Hadle Wickham ‘ggplot2 Elegant Graphics for Data Analysis’.

Genomic signatures, sometimes expressed as a weighted sum of genes, are an algebra over genes.

Put private data and public Xena Data together via UCSC Xena Hub .

Load the private data to Local Xena Data Hub.

Load and analysis data from publication resources, such as GEO.

TissGDB is the tissue-specific gene annotation database in cancer, aiming to provide a resource or reference for cancer and the related disease studies in the context of tissue specificity.